EnhancerDB
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  3. rs535652711[chr5:172172456]
Enhancers that have rs535652711[chr5:172172456]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172156284 172181075 enh22815
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs535652711[chr5:172172456]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172172445 172172457 FOXC2 JASPAR yes 67821436
chr5 172172445 172172459 ONECUT1 JASPAR yes 67821437
chr5 172172445 172172459 ONECUT2 JASPAR yes 67821438
chr5 172172445 172172459 ONECUT3 JASPAR yes 67821439
chr5 172172446 172172456 CUX1 JASPAR yes 67821440
chr5 172172446 172172456 CUX2 JASPAR yes 67821441
chr5 172172446 172172457 FOXB1 JASPAR yes 67821442
chr5 172172446 172172457 FOXC1 JASPAR yes 67821443
chr5 172172454 172172460 TCF4 TRANSFAC yes 67821444
Genes associated with rs535652711[chr5:172172456], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More