EnhancerDB
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  3. rs535666527[chr11:123008658]
Enhancers that have rs535666527[chr11:123008658]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122987085 123025975 enh14347
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs535666527[chr11:123008658]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 123008188 123008824 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108004616
chr11 123008221 123008711 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108004617
chr11 123008347 123008683 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21519754
chr11 123008347 123008683 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108004618
chr11 123008390 123008700 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21519756
chr11 123008390 123008700 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108004621
chr11 123008410 123008677 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21519757
chr11 123008410 123008677 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108004622
chr11 123008657 123008678 IRF1 JASPAR yes 42048668
chr11 123008658 123008673 SOX21 JASPAR yes 42048669
Genes associated with rs535666527[chr11:123008658], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More