EnhancerDB
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  3. rs535800260[chr1:22343495]
Enhancers that have rs535800260[chr1:22343495]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22343446 22360375 enh116
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Spleen Uterus Thymus Stomach
Transcript factors that have rs535800260[chr1:22343495]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22343416 22343816 ZNF274 GTRD no Bone Marrow (K562) 21325277
chr1 22343488 22343502 PLAG1 JASPAR yes 27337931
chr1 22343494 22343512 RARA JASPAR yes 27337932
chr1 22343495 22343503 TBX15 JASPAR yes 27337933
chr1 22343495 22343506 E2F6 JASPAR yes 27337934
Genes associated with rs535800260[chr1:22343495], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More