EnhancerDB
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  3. rs535827409[chr12:125000236]
Enhancers that have rs535827409[chr12:125000236]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124961018 125019902 enh2673
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs535827409[chr12:125000236]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125000226 125000246 TP53 JASPAR yes 124387436
chr12 125000228 125000248 TP63 JASPAR yes 124387437
chr12 125000229 125000247 TP53 JASPAR yes 124387438
chr12 125000230 125000250 TP53 JASPAR yes 124387439
chr12 125000231 125000246 TP53 JASPAR yes 124387440
Genes associated with rs535827409[chr12:125000236], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More