EnhancerDB
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  3. rs535915530[chr16:89450258]
Enhancers that have rs535915530[chr16:89450258]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89410245 89452355 enh16906
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs535915530[chr16:89450258]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89449641 89450374 TCF7L2 GTRD no Colon (HCT116) 21738410
chr16 89449641 89450374 TCF7L2 GTRD no Colon (HCT116) 108225875
chr16 89450239 89450260 ZNF263 JASPAR yes 12339321
chr16 89450251 89450272 ZNF263 JASPAR yes 12339323
chr16 89450254 89450274 RREB1 JASPAR yes 12339324
Genes associated with rs535915530[chr16:89450258], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More