EnhancerDB
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  3. rs535958249[chr2:26239232]
Enhancers that have rs535958249[chr2:26239232]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26217845 26245475 enh18363
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs535958249[chr2:26239232]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26239225 26239236 PHOX2A JASPAR yes 72517107
chr2 26239227 26239247 PPARG JASPAR yes 72517108
chr2 26239228 26239242 GATA2 JASPAR yes 72517109
chr2 26239228 26239245 RXRA JASPAR yes 72517110
chr2 26239230 26239245 ESR2 JASPAR yes 72517111
chr2 26239232 26239240 GATA3 JASPAR yes 72517112
Genes associated with rs535958249[chr2:26239232], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More