EnhancerDB
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  3. rs535981637[chr1:8528960]
Enhancers that have rs535981637[chr1:8528960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs535981637[chr1:8528960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8528953 8528964 CDX2 JASPAR yes 26558699
chr1 8528954 8528965 HOXA10 JASPAR yes 26558700
chr1 8528955 8528964 CDX1 JASPAR yes 26558704
chr1 8528955 8528965 HOXA13 JASPAR yes 26558705
chr1 8528955 8528965 HOXB13 JASPAR yes 26558706
chr1 8528955 8528965 HOXD13 JASPAR yes 26558707
chr1 8528955 8528970 FOXP1 JASPAR yes 26558708
chr1 8528956 8528971 FOXP1 JASPAR yes 26558709
chr1 8528956 8528977 IRF1 JASPAR yes 26558710
chr1 8528957 8528972 FOXP1 JASPAR yes 26558711
chr1 8528959 8528965 TBP TRANSFAC yes 26558712
chr1 8528959 8528974 FOXP1 JASPAR yes 26558713
chr1 8528960 8528981 IRF1 JASPAR yes 26558714
Genes associated with rs535981637[chr1:8528960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More