EnhancerDB
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  3. rs535988558[chr16:85594823]
Enhancers that have rs535988558[chr16:85594823]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs535988558[chr16:85594823]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85594251 85595299 ZNF143 GTRD no Epithelial (MCF-7) 21729207
chr16 85594254 85595337 ZNF274 GTRD no Bone Marrow (K562) 21729208
chr16 85594532 85595631 AR GTRD no Prostate (PC-3) 21729211
chr16 85594543 85595074 ZNF143 GTRD no Epithelial (MCF-7) 21729212
chr16 85594553 85595398 TCF7L2 GTRD no Colon (HCT116) 21729213
chr16 85594571 85595075 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729214
chr16 85594646 85595222 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729215
chr16 85594703 85595540 TCF7L2 GTRD no Colon (HCT116) 21729216
chr16 85594731 85595107 TCF7L2 GTRD no Colon (HCT116) 21729217
chr16 85594745 85595294 ZBTB33 GTRD no Lung (A549) 21729218
chr16 85594757 85595307 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729219
chr16 85594784 85595144 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729220
chr16 85594804 85595260 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729221
chr16 85594807 85595287 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729222
chr16 85594818 85595314 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729223
chr16 85594819 85595491 ZBTB33 GTRD no Lung (A549) 21729224
chr16 85594821 85595315 ZBTB33 GTRD no Lung (A549) 21729225
chr16 85594822 85595278 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729226
Genes associated with rs535988558[chr16:85594823], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More