EnhancerDB
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  3. rs536063296[chr1:235242678]
Enhancers that have rs536063296[chr1:235242678]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235240345 235251255 enh12800
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs536063296[chr1:235242678]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235242542 235243132 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885727
chr1 235242542 235243132 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885728
chr1 235242542 235243132 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885729
chr1 235242611 235243388 TCF7L2 UCSC Txn Factor no Conserved 107885730
chr1 235242611 235243388 TCF7L2 UCSC Txn Factor no Conserved 107885731
chr1 235242622 235243218 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21403541
chr1 235242622 235243218 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107885732
chr1 235242622 235243218 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107885733
chr1 235242661 235242679 ESR1 JASPAR yes 36348832
chr1 235242674 235243170 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21403542
chr1 235242674 235243170 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107885734
chr1 235242674 235243170 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107885735
Genes associated with rs536063296[chr1:235242678], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More