EnhancerDB
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  3. rs536142278[chr19:2536915]
Enhancers that have rs536142278[chr19:2536915]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs536142278[chr19:2536915]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2536905 2536916 CDX2 JASPAR yes 112071089
chr19 2536906 2536917 HOXA10 JASPAR yes 112071090
chr19 2536907 2536916 CDX1 JASPAR yes 112071091
chr19 2536907 2536917 HOXA13 JASPAR yes 112071092
chr19 2536907 2536917 HOXD13 JASPAR yes 112071093
Genes associated with rs536142278[chr19:2536915], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More