EnhancerDB
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  3. rs536158642[chr1:209570408]
Enhancers that have rs536158642[chr1:209570408]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs536158642[chr1:209570408]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209568979 209570481 ZBTB33 GTRD no Lung (A549) 21375194
chr1 209570403 209570424 IRF1 JASPAR yes 34971018
chr1 209570405 209570420 IRF9 JASPAR yes 34971019
chr1 209570406 209570412 TCF4 TRANSFAC yes 34971020
chr1 209570406 209570420 IRF7 JASPAR yes 34971021
chr1 209570408 209570420 IRF1 JASPAR yes 34971022
Genes associated with rs536158642[chr1:209570408], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More