EnhancerDB
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  3. rs536353173[chr1:208389165]
Enhancers that have rs536353173[chr1:208389165]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 208372373 208415646 enh12613
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 208388887 208389573 vista4868
VISTA
Transcript factors that have rs536353173[chr1:208389165]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 208389157 208389172 LEF1 JASPAR yes 34908146
chr1 208389157 208389172 LEF1 JASPAR yes 118447187
chr1 208389161 208389167 LEF1 TRANSFAC yes 34908147
chr1 208389161 208389167 TCF4 TRANSFAC yes 34908148
chr1 208389161 208389167 LEF1 TRANSFAC yes 118447188
chr1 208389161 208389167 TCF4 TRANSFAC yes 118447189
chr1 208389164 208389173 THAP1 JASPAR yes 34908149
chr1 208389164 208389173 THAP1 JASPAR yes 118447190
chr1 208389165 208389171 YY1 JASPAR yes 34908150
chr1 208389165 208389171 YY1 JASPAR yes 118447191
Genes associated with rs536353173[chr1:208389165], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More