EnhancerDB
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  3. rs536405068[chr19:11054296]
Enhancers that have rs536405068[chr19:11054296]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11044165 11061272 enh17918
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs536405068[chr19:11054296]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11054088 11054562 ZNF143 GTRD no Epithelial (MCF-7) 21849279
chr19 11054114 11055142 ZNF143 GTRD no Epithelial (MCF-7) 21849280
chr19 11054294 11054306 FOXC2 JASPAR yes 112447187
chr19 11054294 11054306 MEF2D JASPAR yes 112447188
chr19 11054295 11054307 FOXI1 JASPAR yes 112447189
chr19 11054296 11054310 ONECUT2 JASPAR yes 112447190
chr19 11054296 11054310 ONECUT3 JASPAR yes 112447191
chr19 11054296 11054311 FOXP1 JASPAR yes 112447192
chr19 11054296 11054311 HNF1A JASPAR yes 112447193
Genes associated with rs536405068[chr19:11054296], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More