EnhancerDB
  1. Home
  2. SNP
  3. rs536442406[chr2:232483609]
Enhancers that have rs536442406[chr2:232483609]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs536442406[chr2:232483609]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232483604 232483619 FOXP1 JASPAR yes 81726809
chr2 232483605 232483620 FOXP1 JASPAR yes 81726810
chr2 232483606 232483621 FOXP1 JASPAR yes 81726811
chr2 232483606 232483627 IRF1 JASPAR yes 81726812
chr2 232483607 232483622 FOXP1 JASPAR yes 81726813
chr2 232483607 232483628 IRF1 JASPAR yes 81726814
chr2 232483608 232483623 FOXP1 JASPAR yes 81726815
chr2 232483608 232483629 IRF1 JASPAR yes 81726816
chr2 232483609 232483624 FOXP1 JASPAR yes 81726817
chr2 232483609 232483630 IRF1 JASPAR yes 81726818
Genes associated with rs536442406[chr2:232483609], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More