EnhancerDB
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  3. rs536553564[chr1:183171504]
Enhancers that have rs536553564[chr1:183171504]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 183158919 183172418 enh27304
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Peripheral Blood (MM.1S) Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus
chr1 183171353 183171815 vista4159
VISTA
Transcript factors that have rs536553564[chr1:183171504]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 183171386 183171796 ZNF274 GTRD no Bone Marrow (K562) 107850656
chr1 183171472 183171976 ZNF274 GTRD no Blood (GM12878) 107850657
chr1 183171493 183171504 PROP1 JASPAR yes 33664030
chr1 183171493 183171504 PROP1 JASPAR yes 118411620
chr1 183171495 183171509 ONECUT3 JASPAR yes 33664031
chr1 183171495 183171509 ONECUT3 JASPAR yes 118411621
chr1 183171496 183171511 FOXA1 JASPAR yes 33664032
chr1 183171496 183171511 FOXA1 JASPAR yes 118411622
chr1 183171497 183171508 FOXB1 JASPAR yes 33664033
chr1 183171497 183171508 FOXC1 JASPAR yes 33664034
chr1 183171497 183171508 FOXB1 JASPAR yes 118411623
chr1 183171497 183171508 FOXC1 JASPAR yes 118411624
chr1 183171497 183171509 FOXC2 JASPAR yes 33664035
chr1 183171497 183171509 FOXC2 JASPAR yes 118411625
chr1 183171498 183171510 FOXI1 JASPAR yes 33664036
chr1 183171498 183171510 FOXI1 JASPAR yes 118411626
Genes associated with rs536553564[chr1:183171504], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More