EnhancerDB
  1. Home
  2. SNP
  3. rs536560244[chr1:27928645]
Enhancers that have rs536560244[chr1:27928645]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
chr1 27928507 27928973 vista937
VISTA
Transcript factors that have rs536560244[chr1:27928645]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27927736 27929147 ZNF274 GTRD no Cervix (HeLa-S3) 107802602
chr1 27928632 27928649 PAX1 JASPAR yes 27715104
chr1 27928632 27928649 PAX9 JASPAR yes 27715105
chr1 27928632 27928649 PAX1 JASPAR yes 118259102
chr1 27928632 27928649 PAX9 JASPAR yes 118259103
Genes associated with rs536560244[chr1:27928645], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More