EnhancerDB
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  3. rs536653875[chr17:55453316]
Enhancers that have rs536653875[chr17:55453316]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55440094 55459475 enh17241
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs536653875[chr17:55453316]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55448417 55457368 ZBTB33 GTRD no Lung (A549) 108273940
chr17 55448498 55457254 ZBTB33 GTRD no Lung (A549) 108273941
chr17 55453298 55453318 ESR1 JASPAR yes 54948238
chr17 55453307 55453324 RXRA JASPAR yes 54948241
chr17 55453311 55453325 RXRB JASPAR yes 54948242
chr17 55453311 55453325 RXRG JASPAR yes 54948243
chr17 55453311 55453326 LEF1 JASPAR yes 54948244
chr17 55453311 55453326 NR2C2 JASPAR yes 54948245
chr17 55453312 55453326 TCF7L2 JASPAR yes 54948246
Genes associated with rs536653875[chr17:55453316], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More