EnhancerDB
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  3. rs536655989[chr12:46863930]
Enhancers that have rs536655989[chr12:46863930]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46859389 46872155 enh14677
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs536655989[chr12:46863930]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46863637 46864321 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541810
chr12 46863676 46864272 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541811
chr12 46863765 46864145 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541812
chr12 46863783 46864443 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541813
chr12 46863787 46864151 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541814
chr12 46863810 46864140 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541815
chr12 46863814 46864090 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541816
chr12 46863824 46864094 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541817
chr12 46863868 46864071 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541818
chr12 46863915 46863930 PRDM1 JASPAR yes 120625515
chr12 46863924 46864155 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541819
chr12 46863929 46863935 SOX10 JASPAR yes 120625517
chr12 46863929 46863939 RORA JASPAR yes 120625518
chr12 46863930 46863941 ESRRA JASPAR yes 120625519
chr12 46863930 46863943 NR2F1 JASPAR yes 120625520
Genes associated with rs536655989[chr12:46863930], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More