EnhancerDB
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  3. rs536675940[chr6:33574283]
Enhancers that have rs536675940[chr6:33574283]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs536675940[chr6:33574283]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33574280 33574295 FOXP1 JASPAR yes 101160292
chr6 33574281 33574296 FOXP1 JASPAR yes 101160293
chr6 33574282 33574297 FOXP1 JASPAR yes 101160294
chr6 33574282 33574303 IRF1 JASPAR yes 101160295
chr6 33574283 33574298 FOXP1 JASPAR yes 101160296
chr6 33574283 33574304 IRF1 JASPAR yes 101160297
Genes associated with rs536675940[chr6:33574283], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More