EnhancerDB
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  3. rs536801554[chr17:40399979]
Enhancers that have rs536801554[chr17:40399979]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
Transcript factors that have rs536801554[chr17:40399979]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40398586 40401546 ZBTB33 GTRD no Lung (A549) 108259994
chr17 40399968 40399983 FOXP1 JASPAR yes 54289181
chr17 40399969 40399984 FOXP1 JASPAR yes 54289183
chr17 40399970 40399985 FOXP1 JASPAR yes 54289184
chr17 40399970 40399991 IRF1 JASPAR yes 54289185
chr17 40399971 40399986 FOXP1 JASPAR yes 54289186
Genes associated with rs536801554[chr17:40399979], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More