EnhancerDB
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  3. rs536934482[chr1:52105390]
Enhancers that have rs536934482[chr1:52105390]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52099919 52117655 enh11848
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Uterus Stomach Brain (SK-N-SH) Ovary Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs536934482[chr1:52105390]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52105380 52105390 HOXA13 JASPAR yes 28857865
chr1 52105380 52105390 HOXB13 JASPAR yes 28857866
chr1 52105380 52105391 HOXA10 JASPAR yes 28857867
chr1 52105381 52105390 CDX1 JASPAR yes 28857868
chr1 52105381 52105392 CDX2 JASPAR yes 28857869
chr1 52105384 52105399 LEF1 JASPAR yes 28857870
chr1 52105385 52105397 PBX1 JASPAR yes 28857871
Genes associated with rs536934482[chr1:52105390], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More