EnhancerDB
  1. Home
  2. SNP
  3. rs537078929[chr1:27043877]
Enhancers that have rs537078929[chr1:27043877]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27041525 27053715 enh11655
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs537078929[chr1:27043877]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27043876 27043885 PITX3 JASPAR yes 27652314
chr1 27043876 27043886 GSC2 JASPAR yes 27652315
chr1 27043876 27043886 GSC JASPAR yes 27652316
chr1 27043877 27043885 OTX1 JASPAR yes 27652317
chr1 27043877 27043885 OTX2 JASPAR yes 27652318
chr1 27043877 27043885 RHOXF1 JASPAR yes 27652319
Genes associated with rs537078929[chr1:27043877], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More