EnhancerDB
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  3. rs537389992[chr1:227001564]
Enhancers that have rs537389992[chr1:227001564]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226990625 227018206 enh975
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs537389992[chr1:227001564]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227000936 227001647 ZNF274 GTRD no Bone Marrow (K562) 21387629
chr1 227000976 227001686 ZNF274 GTRD no Bone Marrow (K562) 21387630
chr1 227001557 227001567 TBX21 JASPAR yes 35847121
chr1 227001557 227001570 EOMES JASPAR yes 35847122
chr1 227001558 227001566 MGA JASPAR yes 35847123
chr1 227001558 227001566 TBX15 JASPAR yes 35847124
chr1 227001558 227001566 TBX1 JASPAR yes 35847125
chr1 227001558 227001566 TBX4 JASPAR yes 35847126
chr1 227001558 227001566 TBX5 JASPAR yes 35847127
chr1 227001558 227001568 TBR1 JASPAR yes 35847128
chr1 227001561 227001581 TBX19 JASPAR yes 35847129
chr1 227001563 227001575 PKNOX1 JASPAR yes 35847130
chr1 227001563 227001575 PKNOX2 JASPAR yes 35847131
chr1 227001563 227001575 TGIF1 JASPAR yes 35847132
chr1 227001563 227001575 TGIF2 JASPAR yes 35847133
chr1 227001563 227001579 T JASPAR yes 35847134
chr1 227001563 227001580 RARA JASPAR yes 35847135
Genes associated with rs537389992[chr1:227001564], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More