EnhancerDB
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  3. rs537564049[chr12:122235593]
Enhancers that have rs537564049[chr12:122235593]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122219767 122240055 enh2650
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs537564049[chr12:122235593]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122229445 122242257 POLR2A UCSC Txn Factor no Conserved 108065674
chr12 122235583 122235604 ZNF263 JASPAR yes 124247859
chr12 122235585 122235594 SNAI2 JASPAR yes 124247860
chr12 122235585 122235595 TCF3 JASPAR yes 124247861
chr12 122235585 122235595 TCF4 JASPAR yes 124247862
chr12 122235587 122235596 ZEB1 JASPAR yes 124247863
chr12 122235589 122235594 SP1 TRANSFAC yes 124247864
chr12 122235591 122235596 TFAP2A TRANSFAC yes 124247865
chr12 122235591 122235597 MZF1 JASPAR yes 124247866
Genes associated with rs537564049[chr12:122235593], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More