EnhancerDB
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  3. rs537827946[chr1:229343700]
Enhancers that have rs537827946[chr1:229343700]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229330645 229348935 enh12763
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Ovary Blood (T-cell) Esophagus Brain (SK-N-MC) Stomach Muscle (A673) Placenta Uterus Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs537827946[chr1:229343700]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229340812 229343905 ZNF143 GTRD no Epithelial (MCF-7) 21390638
chr1 229340812 229343905 ZNF143 GTRD no Epithelial (MCF-7) 107877861
chr1 229341112 229343833 ZNF274 GTRD no Bone Marrow (K562) 107877868
chr1 229341115 229343944 ZNF274 GTRD no Bone Marrow (K562) 107877869
chr1 229341117 229343715 ZNF274 GTRD no Bone Marrow (K562) 107877870
chr1 229341125 229343786 ZNF274 GTRD no Bone Marrow (K562) 107877871
chr1 229341155 229343869 ZNF274 GTRD no Liver (HepG2) 21390641
chr1 229341155 229343869 ZNF274 GTRD no Liver (HepG2) 107877876
chr1 229341193 229343881 ZBTB33 GTRD no Lung (A549) 107877887
chr1 229341197 229343831 ZNF274 GTRD no Blood (GM12878) 107877889
chr1 229341234 229343794 ZNF274 GTRD no Blood (GM12878) 107877899
chr1 229341313 229343986 ZNF274 GTRD no Liver (HepG2) 21390661
chr1 229341313 229343986 ZNF274 GTRD no Liver (HepG2) 107877926
chr1 229342121 229343867 ZNF274 GTRD no Liver (HepG2) 21390693
chr1 229342756 229343808 ZNF274 GTRD no Cervix (HeLa-S3) 21390718
chr1 229342924 229343825 GATA3 GTRD no Thymus 21390720
chr1 229343133 229343971 ZNF274 GTRD no Liver (HepG2) 21390722
chr1 229343213 229343946 ZNF274 GTRD no Cervix (HeLa-S3) 21390725
chr1 229343338 229343702 ZNF274 GTRD no Liver (HepG2) 21390726
chr1 229343683 229343704 IRF1 JASPAR yes 35974376
chr1 229343687 229343702 PRDM1 JASPAR yes 35974377
chr1 229343688 229343700 IRF1 JASPAR yes 35974378
chr1 229343689 229343704 FOXP1 JASPAR yes 35974379
chr1 229343689 229343710 IRF1 JASPAR yes 35974380
chr1 229343693 229343714 IRF1 JASPAR yes 35974381
chr1 229343694 229343709 FOXP1 JASPAR yes 35974382
chr1 229343694 229343715 IRF1 JASPAR yes 35974383
chr1 229343699 229343714 FOXP1 JASPAR yes 35974384
chr1 229343699 229343720 IRF1 JASPAR yes 35974385
Genes associated with rs537827946[chr1:229343700], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More