EnhancerDB
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  3. rs537878178[chr5:172169420]
Enhancers that have rs537878178[chr5:172169420]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172156284 172181075 enh22815
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs537878178[chr5:172169420]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172169399 172169420 IRF1 JASPAR yes 67820969
chr5 172169400 172169421 IRF1 JASPAR yes 67820971
chr5 172169401 172169422 IRF1 JASPAR yes 67820973
chr5 172169403 172169424 IRF1 JASPAR yes 67820976
chr5 172169404 172169425 IRF1 JASPAR yes 67820978
chr5 172169405 172169420 FOXP1 JASPAR yes 67820979
chr5 172169406 172169421 FOXP1 JASPAR yes 67820980
chr5 172169407 172169422 FOXP1 JASPAR yes 67820981
chr5 172169408 172169423 FOXP1 JASPAR yes 67820982
chr5 172169410 172169425 FOXP1 JASPAR yes 67820983
chr5 172169410 172169431 IRF1 JASPAR yes 67820984
chr5 172169412 172169427 FOXP1 JASPAR yes 67820985
Genes associated with rs537878178[chr5:172169420], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More