EnhancerDB
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  3. rs538026560[chr2:28857798]
Enhancers that have rs538026560[chr2:28857798]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs538026560[chr2:28857798]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28857777 28857798 IRF1 JASPAR yes 72661945
chr2 28857783 28857798 FOXP1 JASPAR yes 72661947
chr2 28857783 28857804 IRF1 JASPAR yes 72661948
chr2 28857784 28857799 FOXP1 JASPAR yes 72661949
chr2 28857791 28857802 FOXC1 JASPAR yes 72661950
Genes associated with rs538026560[chr2:28857798], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More