EnhancerDB
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  3. rs538041053[chr1:112140629]
Enhancers that have rs538041053[chr1:112140629]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 112128419 112151455 enh566
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs538041053[chr1:112140629]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 112140624 112140630 TCF4 TRANSFAC yes 31532079
chr1 112140629 112140638 NKX3-2 JASPAR yes 31532080
Genes associated with rs538041053[chr1:112140629], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More