EnhancerDB
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  3. rs538073560[chr16:21518380]
Enhancers that have rs538073560[chr16:21518380]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 21511505 21540535 enh3934
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs538073560[chr16:21518380]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 21517696 21520928 ZNF143 GTRD no Epithelial (MCF-7) 21696289
chr16 21517773 21520957 ZNF143 GTRD no Epithelial (MCF-7) 21696290
chr16 21517792 21518814 ZNF274 GTRD no Cervix (HeLa-S3) 21696291
chr16 21517800 21518848 ZNF274 GTRD no Liver (HepG2) 21696292
chr16 21517820 21520797 ZNF274 GTRD no Bone Marrow (K562) 21696294
chr16 21517835 21518882 ZNF274 GTRD no Liver (HepG2) 21696295
chr16 21517841 21518903 ZNF274 GTRD no Cervix (HeLa-S3) 21696296
chr16 21517847 21518953 ZNF143 GTRD no Epithelial (MCF-7) 21696297
chr16 21517853 21518871 ZNF143 GTRD no Epithelial (MCF-7) 21696298
chr16 21517867 21518483 ZNF274 GTRD no Liver (HepG2) 21696299
chr16 21517875 21518862 ZNF143 GTRD no Epithelial (MCF-7) 21696300
chr16 21517922 21518830 ZNF143 GTRD no Epithelial (MCF-7) 21696301
chr16 21517939 21518957 ZNF143 GTRD no Epithelial (MCF-7) 21696302
chr16 21517940 21518962 ZNF143 GTRD no Epithelial (MCF-7) 21696303
chr16 21517943 21518493 ZNF274 GTRD no Bone Marrow (K562) 21696304
chr16 21517947 21518414 ZNF274 GTRD no Liver (HepG2) 21696305
chr16 21517957 21518768 ZNF143 GTRD no Epithelial (MCF-7) 21696306
chr16 21517960 21518907 ZNF143 GTRD no Epithelial (MCF-7) 21696307
chr16 21517961 21518477 ZNF274 GTRD no Liver (HepG2) 21696308
chr16 21517965 21518780 ZNF274 GTRD no Cervix (HeLa-S3) 21696309
chr16 21517971 21518478 ZNF274 GTRD no Bone Marrow (K562) 21696310
chr16 21517988 21518893 ZNF143 GTRD no Epithelial (MCF-7) 21696311
chr16 21518001 21518685 ZNF143 GTRD no Epithelial (MCF-7) 21696312
chr16 21518010 21518837 ZNF143 GTRD no Epithelial (MCF-7) 21696313
chr16 21518021 21518784 ZNF143 GTRD no Epithelial (MCF-7) 21696314
chr16 21518031 21519538 ZNF143 GTRD no Epithelial (MCF-7) 21696315
chr16 21518037 21518482 ZNF274 GTRD no Liver (HepG2) 21696316
chr16 21518046 21518453 ZNF274 GTRD no Bone Marrow (K562) 21696317
chr16 21518047 21518845 ZNF143 GTRD no Epithelial (MCF-7) 21696318
chr16 21518069 21518431 ZNF274 GTRD no Liver (HepG2) 21696319
chr16 21518079 21518409 ZNF274 GTRD no Liver (HepG2) 21696320
chr16 21518081 21518428 ZNF143 GTRD no Epithelial (MCF-7) 21696321
chr16 21518084 21518430 ZNF274 GTRD no Bone Marrow (K562) 21696323
chr16 21518116 21518659 ZNF143 GTRD no Epithelial (MCF-7) 21696324
chr16 21518207 21518469 ZNF274 GTRD no Bone Marrow (K562) 21696325
chr16 21518271 21518536 TCF7L2 GTRD no Colon (HCT116) 21696326
chr16 21518287 21518837 ZNF143 GTRD no Epithelial (MCF-7) 21696327
chr16 21518351 21518769 ZNF274 GTRD no Liver (HepG2) 21696328
chr16 21518352 21518775 ZNF143 GTRD no Epithelial (MCF-7) 21696329
chr16 21518355 21518774 ZNF143 GTRD no Epithelial (MCF-7) 21696330
chr16 21518371 21518785 ZNF143 GTRD no Epithelial (MCF-7) 21696331
chr16 21518380 21518384 H4TF2 TRANSFAC yes 9927520
Genes associated with rs538073560[chr16:21518380], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More