EnhancerDB
  1. Home
  2. SNP
  3. rs538089600[chr17:65427178]
Enhancers that have rs538089600[chr17:65427178]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65424869 65443995 enh17322
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs538089600[chr17:65427178]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65427164 65427179 STAT2 JASPAR yes 55502883
chr17 65427165 65427179 STAT1 JASPAR yes 55502884
chr17 65427168 65427189 IRF1 JASPAR yes 55502885
chr17 65427170 65427185 STAT2 JASPAR yes 55502886
chr17 65427171 65427185 STAT1 JASPAR yes 55502887
chr17 65427172 65427187 IRF9 JASPAR yes 55502888
chr17 65427172 65427193 IRF1 JASPAR yes 55502889
chr17 65427173 65427188 FOXP1 JASPAR yes 55502890
chr17 65427175 65427190 FOXP1 JASPAR yes 55502891
chr17 65427177 65427192 FOXP1 JASPAR yes 55502892
chr17 65427178 65427193 FOXP1 JASPAR yes 55502893
Genes associated with rs538089600[chr17:65427178], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More