EnhancerDB
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  3. rs538140136[chr19:2542879]
Enhancers that have rs538140136[chr19:2542879]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs538140136[chr19:2542879]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2540177 2543122 TCF7L2 GTRD no Colon (HCT116) 21836487
chr19 2540177 2543122 TCF7L2 GTRD no Colon (HCT116) 108361549
chr19 2540208 2543082 TCF7L2 GTRD no Colon (HCT116) 21836489
chr19 2540208 2543082 TCF7L2 GTRD no Colon (HCT116) 108361551
chr19 2540241 2543099 TCF7L2 GTRD no Colon (HCT116) 21836490
chr19 2540241 2543099 TCF7L2 GTRD no Colon (HCT116) 108361553
chr19 2540326 2544542 ZNF274 GTRD no Cervix (HeLa-S3) 21836499
chr19 2540326 2544542 ZNF274 GTRD no Cervix (HeLa-S3) 108361562
chr19 2540326 2544542 ZNF274 GTRD no Cervix (HeLa-S3) 108361563
chr19 2540326 2544542 ZNF274 GTRD no Cervix (HeLa-S3) 108361564
chr19 2540333 2544227 TCF7L2 GTRD no Colon (HCT116) 21836500
chr19 2540333 2544227 TCF7L2 GTRD no Colon (HCT116) 108361565
chr19 2540333 2544227 TCF7L2 GTRD no Colon (HCT116) 108361566
chr19 2540333 2544227 TCF7L2 GTRD no Colon (HCT116) 108361567
chr19 2541769 2544238 ZNF274 GTRD no Blood (GM12878) 108361847
chr19 2541769 2544238 ZNF274 GTRD no Blood (GM12878) 108361848
chr19 2542207 2544218 ZNF274 GTRD no Liver (HepG2) 21836754
chr19 2542207 2544218 ZNF274 GTRD no Liver (HepG2) 108361849
chr19 2542207 2544218 ZNF274 GTRD no Liver (HepG2) 108361850
chr19 2542237 2544706 ZNF274 GTRD no Cervix (HeLa-S3) 21836755
chr19 2542237 2544706 ZNF274 GTRD no Cervix (HeLa-S3) 108361851
chr19 2542237 2544706 ZNF274 GTRD no Cervix (HeLa-S3) 108361852
chr19 2542249 2544098 ZNF274 GTRD no Liver (HepG2) 21836756
chr19 2542249 2544098 ZNF274 GTRD no Liver (HepG2) 108361853
chr19 2542249 2544098 ZNF274 GTRD no Liver (HepG2) 108361854
chr19 2542287 2544128 ZNF274 GTRD no Cervix (HeLa-S3) 21836757
chr19 2542287 2544128 ZNF274 GTRD no Cervix (HeLa-S3) 108361855
chr19 2542287 2544128 ZNF274 GTRD no Cervix (HeLa-S3) 108361856
chr19 2542330 2544576 ZNF274 GTRD no Liver (HepG2) 21836758
chr19 2542330 2544576 ZNF274 GTRD no Liver (HepG2) 108361857
chr19 2542330 2544576 ZNF274 GTRD no Liver (HepG2) 108361858
chr19 2542348 2544120 ZNF274 GTRD no Liver (HepG2) 21836759
chr19 2542348 2544120 ZNF274 GTRD no Liver (HepG2) 108361859
chr19 2542348 2544120 ZNF274 GTRD no Liver (HepG2) 108361860
chr19 2542437 2544450 ZNF274 GTRD no Bone Marrow (K562) 21836760
chr19 2542437 2544450 ZNF274 GTRD no Bone Marrow (K562) 108361861
chr19 2542437 2544450 ZNF274 GTRD no Bone Marrow (K562) 108361862
chr19 2542867 2542888 IRF1 JASPAR yes 112072119
chr19 2542868 2542883 FOXP1 JASPAR yes 112072120
chr19 2542868 2542889 IRF1 JASPAR yes 112072121
chr19 2542869 2542880 FOXP2 JASPAR yes 112072122
chr19 2542871 2542879 FOXO3 JASPAR yes 112072123
chr19 2542872 2542886 SPIC JASPAR yes 112072124
chr19 2542873 2542894 IRF1 JASPAR yes 112072125
chr19 2542874 2542895 IRF1 JASPAR yes 112072126
chr19 2542875 2542880 ETS2 TRANSFAC yes 112072127
chr19 2542875 2542896 IRF1 JASPAR yes 112072128
chr19 2542876 2542897 IRF1 JASPAR yes 112072129
chr19 2542877 2542892 FOXP1 JASPAR yes 112072130
chr19 2542877 2542898 IRF1 JASPAR yes 112072131
chr19 2542878 2542893 FOXP1 JASPAR yes 112072132
chr19 2542879 2542894 FOXP1 JASPAR yes 112072133
Genes associated with rs538140136[chr19:2542879], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More