EnhancerDB
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  3. rs538219563[chr15:41089915]
Enhancers that have rs538219563[chr15:41089915]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 41072825 41093715 enh16067
Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs538219563[chr15:41089915]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 41089909 41089930 IRF1 JASPAR yes 22955532
chr15 41089910 41089931 IRF1 JASPAR yes 22955533
chr15 41089911 41089926 STAT2 JASPAR yes 22955534
chr15 41089911 41089932 IRF1 JASPAR yes 22955535
chr15 41089912 41089927 FOXP1 JASPAR yes 22955536
chr15 41089912 41089933 IRF1 JASPAR yes 22955537
chr15 41089913 41089934 IRF1 JASPAR yes 22955538
chr15 41089914 41089929 FOXP1 JASPAR yes 22955539
chr15 41089914 41089935 IRF1 JASPAR yes 22955540
chr15 41089915 41089930 FOXP1 JASPAR yes 22955541
chr15 41089915 41089936 IRF1 JASPAR yes 22955542
Genes associated with rs538219563[chr15:41089915], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More