EnhancerDB
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  3. rs538252203[chr1:1004737]
Enhancers that have rs538252203[chr1:1004737]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 992241 1006235 enh11407
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Pancreas Thymus
chr1 1004646 1004986 vista15
VISTA
Transcript factors that have rs538252203[chr1:1004737]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1002785 1007204 TCF7L2 GTRD no Colon (HCT116) 107801768
chr1 1002785 1007204 TCF7L2 GTRD no Colon (HCT116) 107801769
chr1 1004731 1004743 NHLH1 JASPAR yes 26179446
chr1 1004731 1004743 NHLH1 JASPAR yes 118213782
chr1 1004731 1004751 TP63 JASPAR yes 26179447
chr1 1004731 1004751 TP63 JASPAR yes 118213783
chr1 1004732 1004741 SNAI2 JASPAR yes 26179448
chr1 1004732 1004741 SNAI2 JASPAR yes 118213784
chr1 1004732 1004742 TCF3 JASPAR yes 26179449
chr1 1004732 1004742 TCF4 JASPAR yes 26179450
chr1 1004732 1004742 TCF3 JASPAR yes 118213785
chr1 1004732 1004742 TCF4 JASPAR yes 118213786
chr1 1004734 1004743 ZEB1 JASPAR yes 26179451
chr1 1004734 1004743 ZEB1 JASPAR yes 118213787
chr1 1004736 1004741 SP1 TRANSFAC yes 26179452
chr1 1004736 1004741 SP1 TRANSFAC yes 118213788
Genes associated with rs538252203[chr1:1004737], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More