EnhancerDB
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  3. vista15[chr1:1004646-1004986]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista15[chr1:1004646-1004986]
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Tissue distribution of vista15
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Transcription factor that possibly regulate vista15[chr1:1004646-1004986]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 1004644 1004649 TFAP2A TRANSFAC yes 26179436
chr1 1004644 1004649 TFAP2A TRANSFAC yes 118213772
chr1 1004644 1004650 MZF1 JASPAR yes 26179437
chr1 1004644 1004650 MZF1 JASPAR yes 118213773
chr1 1004701 1004711 ETV3 JASPAR yes 26179438
chr1 1004701 1004711 ETV5 JASPAR yes 26179439
chr1 1004701 1004711 ETV3 JASPAR yes 118213774
chr1 1004701 1004711 ETV5 JASPAR yes 118213775
chr1 1004701 1004712 SPDEF JASPAR yes 26179440
chr1 1004701 1004712 SPDEF JASPAR yes 118213776
chr1 1004701 1004713 ELF1 JASPAR yes 26179441
chr1 1004701 1004713 ELF1 JASPAR yes 118213777
chr1 1004702 1004711 ELK4 JASPAR yes 26179442
chr1 1004702 1004711 ELK4 JASPAR yes 118213778
chr1 1004716 1004719 MYB TRANSFAC yes 26179443
chr1 1004716 1004719 MYB TRANSFAC yes 118213779
chr1 1004720 1004731 NRF1 JASPAR yes 26179444
chr1 1004720 1004731 NRF1 JASPAR yes 118213780
chr1 1004721 1004732 NRF1 JASPAR yes 26179445
chr1 1004721 1004732 NRF1 JASPAR yes 118213781
chr1 1004731 1004743 NHLH1 JASPAR yes 26179446
chr1 1004731 1004743 NHLH1 JASPAR yes 118213782
chr1 1004731 1004751 TP63 JASPAR yes 26179447
chr1 1004731 1004751 TP63 JASPAR yes 118213783
chr1 1004732 1004741 SNAI2 JASPAR yes 26179448
chr1 1004732 1004741 SNAI2 JASPAR yes 118213784
chr1 1004732 1004742 TCF3 JASPAR yes 26179449
chr1 1004732 1004742 TCF4 JASPAR yes 26179450
chr1 1004732 1004742 TCF3 JASPAR yes 118213785
chr1 1004732 1004742 TCF4 JASPAR yes 118213786
chr1 1004734 1004743 ZEB1 JASPAR yes 26179451
chr1 1004734 1004743 ZEB1 JASPAR yes 118213787
chr1 1004736 1004741 SP1 TRANSFAC yes 26179452
chr1 1004736 1004741 SP1 TRANSFAC yes 118213788
chr1 1004745 1004759 PLAG1 JASPAR yes 26179453
chr1 1004745 1004759 PLAG1 JASPAR yes 118213789
chr1 1004747 1004760 TFAP2A JASPAR yes 26179454
chr1 1004747 1004760 TFAP2C JASPAR yes 26179455
chr1 1004747 1004760 TFAP2A JASPAR yes 118213790
chr1 1004747 1004760 TFAP2C JASPAR yes 118213791
chr1 1004748 1004763 ZIC3 JASPAR yes 26179456
chr1 1004748 1004763 ZIC4 JASPAR yes 26179457
chr1 1004748 1004763 ZIC3 JASPAR yes 118213792
chr1 1004748 1004763 ZIC4 JASPAR yes 118213793
chr1 1004749 1004763 ZIC1 JASPAR yes 26179458
chr1 1004749 1004763 ZIC1 JASPAR yes 118213794
chr1 1004766 1004776 GCM2 JASPAR yes 26179459
chr1 1004766 1004776 GCM2 JASPAR yes 118213795
chr1 1004770 1004789 RFX2 JASPAR yes 26179460
chr1 1004770 1004789 RFX2 JASPAR yes 118213796
chr1 1004774 1004790 RFX2 JASPAR yes 26179461
chr1 1004774 1004790 RFX3 JASPAR yes 26179462
chr1 1004774 1004790 RFX4 JASPAR yes 26179463
chr1 1004774 1004790 RFX5 JASPAR yes 26179464
chr1 1004774 1004790 RFX2 JASPAR yes 118213797
chr1 1004774 1004790 RFX3 JASPAR yes 118213798
chr1 1004774 1004790 RFX4 JASPAR yes 118213799
chr1 1004774 1004790 RFX5 JASPAR yes 118213800
chr1 1004775 1004793 ESR1 JASPAR yes 26179465
chr1 1004775 1004793 ESR1 JASPAR yes 118213801
chr1 1004775 1004794 RFX2 JASPAR yes 26179466
chr1 1004775 1004794 RFX2 JASPAR yes 118213802
chr1 1004777 1004792 RFX5 JASPAR yes 26179467
chr1 1004777 1004792 RFX5 JASPAR yes 118213803
chr1 1004792 1004807 NR2C2 JASPAR yes 26179468
chr1 1004792 1004807 NR2C2 JASPAR yes 118213804
chr1 1004795 1004801 SP1 TRANSFAC yes 26179469
chr1 1004795 1004801 SP1 TRANSFAC yes 118213805
chr1 1004795 1004805 SP1 JASPAR yes 26179470
chr1 1004795 1004805 SP1 JASPAR yes 118213806
chr1 1004796 1004806 SP1 JASPAR yes 26179471
chr1 1004796 1004806 SP1 JASPAR yes 118213807
chr1 1004819 1004834 ZBTB33 JASPAR yes 26179472
chr1 1004819 1004834 ZBTB33 JASPAR yes 118213808
chr1 1004822 1004833 E2F1 JASPAR yes 26179473
chr1 1004822 1004833 E2F1 JASPAR yes 118213809
chr1 1004846 1004856 SP1 JASPAR yes 26179474
chr1 1004846 1004856 SP1 JASPAR yes 118213810
chr1 1004848 1004853 SP1 TRANSFAC yes 26179475
chr1 1004848 1004853 SP1 TRANSFAC yes 118213811
chr1 1004848 1004854 SP1 TRANSFAC yes 26179476
chr1 1004848 1004854 SP1 TRANSFAC yes 118213812
chr1 1004848 1004855 SP1 TRANSFAC yes 26179477
chr1 1004848 1004855 SP1 TRANSFAC yes 118213813
chr1 1004849 1004863 GLIS2 JASPAR yes 26179478
chr1 1004849 1004863 GLIS2 JASPAR yes 118213814
chr1 1004849 1004864 ZIC3 JASPAR yes 26179479
chr1 1004849 1004864 ZIC4 JASPAR yes 26179480
chr1 1004849 1004864 ZIC3 JASPAR yes 118213815
chr1 1004849 1004864 ZIC4 JASPAR yes 118213816
chr1 1004871 1004882 TFAP2A JASPAR yes 26179481
chr1 1004871 1004882 TFAP2B JASPAR yes 26179482
chr1 1004871 1004882 TFAP2C JASPAR yes 26179483
chr1 1004871 1004882 TFAP2A JASPAR yes 118213817
chr1 1004871 1004882 TFAP2B JASPAR yes 118213818
chr1 1004871 1004882 TFAP2C JASPAR yes 118213819
chr1 1004872 1004881 TFAP2A JASPAR yes 26179484
chr1 1004872 1004881 TFAP2A JASPAR yes 118213820
chr1 1004878 1004898 TP53 JASPAR yes 26179485
chr1 1004878 1004898 TP53 JASPAR yes 118213821
chr1 1004884 1004897 NFKB2 JASPAR yes 26179486
chr1 1004884 1004897 NFKB2 JASPAR yes 118213822
chr1 1004885 1004896 NFKB1 JASPAR yes 26179487
chr1 1004885 1004896 NFKB1 JASPAR yes 118213823
chr1 1004886 1004890 LFA1 TRANSFAC yes 26179488
chr1 1004886 1004890 LFA1 TRANSFAC yes 118213824
chr1 1004886 1004896 NFKB1 JASPAR yes 26179489
chr1 1004886 1004896 NFKB1 JASPAR yes 118213825
chr1 1004913 1004918 SP1 TRANSFAC yes 26179490
chr1 1004913 1004918 SP1 TRANSFAC yes 118213826
chr1 1004913 1004920 SP1 TRANSFAC yes 26179491
chr1 1004913 1004920 SP1 TRANSFAC yes 118213827
chr1 1004919 1004923 H4TF2 TRANSFAC yes 26179492
chr1 1004919 1004923 H4TF2 TRANSFAC yes 118213828
chr1 1004934 1004940 MAZ TRANSFAC yes 26179493
chr1 1004934 1004940 MAZ TRANSFAC yes 118213829
chr1 1004943 1004955 HES7 JASPAR yes 26179494
chr1 1004943 1004955 HES7 JASPAR yes 118213830
SNP sites on vista15[chr1:1004646-1004986]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 1004737 rs538252203 GGTGGGGGCGTGGCCCTGCGGGGCGTGGCCT G
NHLH1 SNAI2 SP1 TCF3 TCF4 TP63 ZEB1
2598
chr1 1004741 rs529180079 G C
NHLH1 SNAI2 SP1 TCF3 TCF4 TP63 ZEB1
2599
chr1 1004782 rs4073174 A C
ESR1 RFX2 RFX3 RFX4 RFX5
2600
chr1 1004823 rs375636065 G A
E2F1 ZBTB33
2601
chr1 1004857 rs551276560 C T
GLIS2 ZIC3 ZIC4
2602
chr1 1004884 rs567895005 C T
NFKB2 TP53
2603
chr1 1004946 rs4073175 G A
HES7
2604
chr1 1004957 rs4073176 G A no 2605
chr1 1004980 rs4073177 G A no 2606
Genes possibly regulated by vista15[chr1:1004646-1004986]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 910579 917497 - C1orf170 ENSG00000187642.5 917497 0.99 1.0 10 12851
chr1 934342 935552 - HES4 ENSG00000188290.6 935552 0.71 1.0 11 30906
chr1 948803 949920 + ISG15 ENSG00000187608.5 948803 0.81 1.0 12 44157
chr1 955503 991496 + AGRN ENSG00000188157.9 955503 0.91 1.0 13 50857
chr1 1006346 1009687 - RNF223 ENSG00000237330.2 1009687 0.97 1.0 14 95299
chr1 1017198 1051741 - C1orf159 ENSG00000131591.13 1051741 0.65 1.0 15 53245
Expression level of Genes
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miRNAs possibly regulated by vista15[chr1:1004646-1004986]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results