EnhancerDB
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  3. rs538277598[chr1:225643260]
Enhancers that have rs538277598[chr1:225643260]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs538277598[chr1:225643260]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225643255 225643260 GATA2 JASPAR yes 35742460
chr1 225643255 225643270 MEF2C JASPAR yes 35742461
chr1 225643258 225643273 FOXP1 JASPAR yes 35742462
chr1 225643258 225643279 IRF1 JASPAR yes 35742463
chr1 225643259 225643274 FOXP1 JASPAR yes 35742464
chr1 225643260 225643275 FOXP1 JASPAR yes 35742465
Genes associated with rs538277598[chr1:225643260], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More