EnhancerDB
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  3. rs538304639[chr16:25050387]
Enhancers that have rs538304639[chr16:25050387]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 25036065 25069195 enh3955
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs538304639[chr16:25050387]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 25047668 25051087 ZBTB33 GTRD no Lung (A549) 108189518
chr16 25047687 25050539 ZBTB33 GTRD no Lung (A549) 108189519
chr16 25047870 25050428 ZNF274 GTRD no Bone Marrow (K562) 21699664
chr16 25047870 25050428 ZNF274 GTRD no Bone Marrow (K562) 108189521
chr16 25047887 25050826 ZBTB33 GTRD no Lung (A549) 108189523
chr16 25047904 25050948 TCF7L2 GTRD no Colon (HCT116) 108189525
chr16 25047945 25051035 ZBTB33 GTRD no Lung (A549) 108189527
chr16 25048048 25050456 ZNF274 GTRD no Cervix (HeLa-S3) 21699678
chr16 25048048 25050456 ZNF274 GTRD no Cervix (HeLa-S3) 108189534
chr16 25048100 25050826 ZBTB33 GTRD no Lung (A549) 108189538
chr16 25048321 25050456 ZNF274 GTRD no Cervix (HeLa-S3) 21699700
chr16 25048321 25050456 ZNF274 GTRD no Cervix (HeLa-S3) 108189545
chr16 25048429 25050428 ZNF143 GTRD no Epithelial (MCF-7) 21699718
chr16 25048429 25050428 ZNF143 GTRD no Epithelial (MCF-7) 108189548
chr16 25049283 25050554 ZNF274 GTRD no Bone Marrow (K562) 21699766
chr16 25049283 25050554 ZNF274 GTRD no Bone Marrow (K562) 108189555
chr16 25049341 25050477 AR GTRD no Prostate (PC-3) 21699773
chr16 25049341 25050477 AR GTRD no Prostate (PC-3) 108189565
chr16 25049358 25050444 ZNF143 GTRD no Epithelial (MCF-7) 21699778
chr16 25049358 25050444 ZNF143 GTRD no Epithelial (MCF-7) 108189570
chr16 25049459 25050952 ZBTB33 GTRD no Lung (A549) 108189592
chr16 25049465 25050486 ZNF143 GTRD no Epithelial (MCF-7) 21699793
chr16 25049465 25050486 ZNF143 GTRD no Epithelial (MCF-7) 108189596
chr16 25049477 25050474 ZNF143 GTRD no Epithelial (MCF-7) 21699796
chr16 25049477 25050474 ZNF143 GTRD no Epithelial (MCF-7) 108189600
chr16 25049503 25050829 ZBTB33 GTRD no Lung (A549) 108189609
chr16 25049735 25050395 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21699819
chr16 25049735 25050395 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108189628
chr16 25049861 25050699 ZNF274 GTRD no Bone Marrow (K562) 21699828
chr16 25049861 25050699 ZNF274 GTRD no Bone Marrow (K562) 108189637
chr16 25050115 25050831 ZNF274 GTRD no Bone Marrow (K562) 21699843
chr16 25050115 25050831 ZNF274 GTRD no Bone Marrow (K562) 108189654
chr16 25050323 25051218 STAT3 GTRD no Blood (OCI-LY7) 21699844
chr16 25050381 25050402 IRF1 JASPAR yes 10098236
chr16 25050382 25050403 IRF1 JASPAR yes 10098237
chr16 25050385 25050400 FOXP1 JASPAR yes 10098238
chr16 25050386 25050401 FOXP1 JASPAR yes 10098239
chr16 25050387 25050402 FOXP1 JASPAR yes 10098240
Genes associated with rs538304639[chr16:25050387], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More