EnhancerDB
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  3. rs538338008[chr12:52619394]
Enhancers that have rs538338008[chr12:52619394]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs538338008[chr12:52619394]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52618725 52619449 ZNF143 GTRD no Epithelial (MCF-7) 21546898
chr12 52619379 52619399 PPARG JASPAR yes 120930701
chr12 52619388 52619409 IRF1 JASPAR yes 120930702
chr12 52619390 52619405 PRDM1 JASPAR yes 120930703
chr12 52619390 52619405 STAT2 JASPAR yes 120930704
chr12 52619393 52619408 FOXP1 JASPAR yes 120930705
chr12 52619394 52619409 FOXP1 JASPAR yes 120930706
Genes associated with rs538338008[chr12:52619394], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More