EnhancerDB
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Enhancers that have rs538340220[chr17:41522289]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41518125 41539515 enh17169
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Prostate (RWPE1) Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Stomach Placenta Thyroid Adrenal Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs538340220[chr17:41522289]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41518767 41523144 ZNF274 GTRD no Cervix (HeLa-S3) 21760266
chr17 41518935 41523274 ZNF143 GTRD no Epithelial (MCF-7) 21760279
chr17 41519281 41523404 ZNF143 GTRD no Epithelial (MCF-7) 21760293
chr17 41520571 41526147 ZNF143 GTRD no Epithelial (MCF-7) 21760302
chr17 41520592 41523202 ZNF274 GTRD no Cervix (HeLa-S3) 21760303
chr17 41520594 41525787 ZNF143 GTRD no Epithelial (MCF-7) 21760304
chr17 41520662 41522432 ZNF274 GTRD no Cervix (HeLa-S3) 21760305
chr17 41520682 41523128 ZNF143 GTRD no Epithelial (MCF-7) 21760306
chr17 41520706 41522662 ZNF274 GTRD no Cervix (HeLa-S3) 21760307
chr17 41520752 41523269 ZBTB33 GTRD no Lung (A549) 21760308
chr17 41520753 41523251 ZNF274 GTRD no Cervix (HeLa-S3) 21760309
chr17 41520763 41523291 ZBTB33 GTRD no Lung (A549) 21760310
chr17 41520773 41522785 ZNF143 GTRD no Epithelial (MCF-7) 21760311
chr17 41520780 41523106 ZNF143 GTRD no Epithelial (MCF-7) 21760312
chr17 41520797 41523762 ZBTB33 GTRD no Lung (A549) 21760313
chr17 41520851 41522969 ZNF274 GTRD no Cervix (HeLa-S3) 21760315
chr17 41520863 41526178 ZNF143 GTRD no Epithelial (MCF-7) 21760316
chr17 41520865 41523267 ZNF143 GTRD no Epithelial (MCF-7) 21760317
chr17 41520917 41523271 ZNF143 GTRD no Epithelial (MCF-7) 21760318
chr17 41520922 41522536 ZNF143 GTRD no Epithelial (MCF-7) 21760319
chr17 41520940 41523192 ZNF143 GTRD no Epithelial (MCF-7) 21760320
chr17 41520946 41522984 ZNF143 GTRD no Epithelial (MCF-7) 21760321
chr17 41521024 41522990 ZNF143 GTRD no Epithelial (MCF-7) 21760322
chr17 41521025 41522920 ZNF143 GTRD no Epithelial (MCF-7) 21760323
chr17 41521048 41523231 ZNF143 GTRD no Epithelial (MCF-7) 21760324
chr17 41521074 41522891 ZNF143 GTRD no Epithelial (MCF-7) 21760326
chr17 41521079 41523235 ZNF143 GTRD no Epithelial (MCF-7) 21760327
chr17 41521086 41523080 ZNF143 GTRD no Epithelial (MCF-7) 21760328
chr17 41521115 41522343 ZNF143 GTRD no Epithelial (MCF-7) 21760329
chr17 41521142 41522317 ZNF274 GTRD no Cervix (HeLa-S3) 21760330
chr17 41521176 41522330 ZNF274 GTRD no Liver (HepG2) 21760331
chr17 41521230 41523026 ZNF143 GTRD no Epithelial (MCF-7) 21760332
chr17 41521230 41523224 ZNF143 GTRD no Epithelial (MCF-7) 21760333
chr17 41521244 41522464 ZBTB33 GTRD no Lung (A549) 21760334
chr17 41521275 41523016 ZNF274 GTRD no Cervix (HeLa-S3) 21760335
chr17 41521280 41522684 ZBTB33 GTRD no Lung (A549) 21760336
chr17 41521288 41522554 ZBTB33 GTRD no Lung (A549) 21760337
chr17 41521288 41523174 ZBTB33 GTRD no Lung (A549) 21760338
chr17 41521356 41522443 ZNF274 GTRD no Liver (HepG2) 21760339
chr17 41521366 41522388 ZBTB33 GTRD no Lung (A549) 21760340
chr17 41521381 41522427 ERG GTRD no Prostate (RWPE1) 21760341
chr17 41521395 41522818 ZNF274 GTRD no Liver (HepG2) 21760342
chr17 41521414 41523064 ZNF143 GTRD no Epithelial (MCF-7) 21760345
chr17 41521480 41523135 ZNF143 GTRD no Epithelial (MCF-7) 21760349
chr17 41521518 41522292 ZNF274 GTRD no Liver (HepG2) 21760352
chr17 41521519 41523005 AR GTRD no Prostate (PC-3) 21760353
chr17 41521535 41522731 ZNF274 GTRD no Cervix (HeLa-S3) 21760356
chr17 41521595 41522809 ZBTB33 GTRD no Lung (A549) 21760362
chr17 41521604 41522735 ZNF143 GTRD no Epithelial (MCF-7) 21760363
chr17 41521611 41522328 ZNF143 GTRD no Epithelial (MCF-7) 21760365
chr17 41521664 41522463 ZBTB33 GTRD no Lung (A549) 21760369
chr17 41521671 41522844 ZNF143 GTRD no Epithelial (MCF-7) 21760371
chr17 41521714 41523138 ZNF143 GTRD no Epithelial (MCF-7) 21760374
chr17 41521715 41523091 ZNF143 GTRD no Epithelial (MCF-7) 21760375
chr17 41521729 41522398 ZNF274 GTRD no Liver (HepG2) 21760377
chr17 41521733 41523090 ZNF143 GTRD no Epithelial (MCF-7) 21760378
chr17 41521741 41522313 ZNF274 GTRD no Liver (HepG2) 21760379
chr17 41521749 41522289 ZNF274 GTRD no Liver (HepG2) 21760380
chr17 41521749 41522578 P63 GTRD no Skin (Keratinocyte) 21760381
chr17 41521820 41522348 ZNF143 GTRD no Epithelial (MCF-7) 21760385
chr17 41521835 41522304 ZNF274 GTRD no Liver (HepG2) 21760386
chr17 41521839 41522432 ZNF143 GTRD no Epithelial (MCF-7) 21760387
chr17 41522049 41522565 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21760391
chr17 41522226 41523068 ZNF143 GTRD no Epithelial (MCF-7) 21760392
chr17 41522231 41523046 ZBTB33 GTRD no Lung (A549) 21760393
chr17 41522281 41522686 ZNF143 GTRD no Epithelial (MCF-7) 21760394
chr17 41522282 41522292 SP1 JASPAR yes 54347208
chr17 41522283 41522291 SP1 TRANSFAC yes 54347209
chr17 41522283 41522292 SP1 TRANSFAC yes 54347210
chr17 41522283 41522293 SP1 JASPAR yes 54347211
chr17 41522284 41522289 SP1 TRANSFAC yes 54347212
chr17 41522285 41522290 SP1 TRANSFAC yes 54347213
chr17 41522285 41522291 SP1 TRANSFAC yes 54347214
chr17 41522288 41522298 GSC2 JASPAR yes 54347215
chr17 41522288 41522298 GSC JASPAR yes 54347216
chr17 41522289 41522297 OTX1 JASPAR yes 54347217
chr17 41522289 41522298 PITX3 JASPAR yes 54347218
Genes associated with rs538340220[chr17:41522289], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More