EnhancerDB
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  3. rs538355743[chr17:71286889]
Enhancers that have rs538355743[chr17:71286889]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 71282705 71302156 enh17360
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs538355743[chr17:71286889]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 71286540 71287018 SOX2 GTRD no Neural Stem Cells (H9) 108290922
chr17 71286562 71286988 SOX2 GTRD no Neural Stem Cells (H9) 108290923
chr17 71286747 71287247 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107689355
chr17 71286747 71287247 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108290924
chr17 71286879 71286891 YY1 JASPAR yes 55858638
chr17 71286881 71286892 YY2 JASPAR yes 55858639
chr17 71286887 71286899 HES7 JASPAR yes 55858640
Genes associated with rs538355743[chr17:71286889], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More