EnhancerDB
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  3. rs538409811[chr1:178998217]
Enhancers that have rs538409811[chr1:178998217]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178994785 179010519 enh771
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Astrocyte Lung Blood (OCI-LY7) Blood (GM12878) Adrenal Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs538409811[chr1:178998217]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178998211 178998221 ALX3 JASPAR yes 33461597
chr1 178998211 178998221 EN2 JASPAR yes 33461598
chr1 178998211 178998221 ESX1 JASPAR yes 33461599
chr1 178998211 178998221 GBX1 JASPAR yes 33461600
chr1 178998211 178998221 GBX2 JASPAR yes 33461601
chr1 178998211 178998221 GSX1 JASPAR yes 33461602
chr1 178998211 178998221 HESX1 JASPAR yes 33461603
chr1 178998211 178998221 HOXA2 JASPAR yes 33461604
chr1 178998211 178998221 LBX2 JASPAR yes 33461605
chr1 178998211 178998221 LHX2 JASPAR yes 33461606
chr1 178998211 178998221 MIXL1 JASPAR yes 33461607
chr1 178998211 178998221 RAX JASPAR yes 33461608
chr1 178998212 178998220 BARX1 JASPAR yes 33461609
chr1 178998212 178998220 BSX JASPAR yes 33461610
chr1 178998212 178998220 EN1 JASPAR yes 33461611
chr1 178998212 178998220 ISX JASPAR yes 33461612
chr1 178998212 178998220 LHX9 JASPAR yes 33461613
chr1 178998212 178998220 MSX1 JASPAR yes 33461614
chr1 178998212 178998220 MSX2 JASPAR yes 33461615
chr1 178998212 178998220 PRRX1 JASPAR yes 33461616
chr1 178998212 178998220 RAX2 JASPAR yes 33461617
chr1 178998212 178998220 SHOX JASPAR yes 33461618
Genes associated with rs538409811[chr1:178998217], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More