EnhancerDB
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  3. rs538449897[chr16:21530053]
Enhancers that have rs538449897[chr16:21530053]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 21511505 21540535 enh3934
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs538449897[chr16:21530053]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 21529631 21530201 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21696954
chr16 21529655 21530185 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21696955
chr16 21529662 21530178 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21696956
chr16 21529800 21530456 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21696958
chr16 21529921 21530317 ZNF274 GTRD no Liver (HepG2) 21696959
chr16 21530036 21530056 RREB1 JASPAR yes 9929426
chr16 21530046 21530057 USF1 JASPAR yes 9929427
chr16 21530047 21530057 TFE3 JASPAR yes 9929428
chr16 21530047 21530057 TFEB JASPAR yes 9929429
chr16 21530047 21530057 TFEC JASPAR yes 9929430
chr16 21530047 21530058 USF2 JASPAR yes 9929431
chr16 21530047 21530065 TP63 JASPAR yes 9929432
Genes associated with rs538449897[chr16:21530053], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More