EnhancerDB
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  3. rs538506598[chr3:125986641]
Enhancers that have rs538506598[chr3:125986641]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 125975545 125994175 enh20889
Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Heart
Transcript factors that have rs538506598[chr3:125986641]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 125986164 125986797 CTCF UCSC Txn Factor no Conserved 108530173
chr3 125986273 125986730 E2F1 UCSC Txn Factor no Conserved 108530176
chr3 125986626 125986641 RUNX2 JASPAR yes 5475962
chr3 125986630 125986645 RFX5 JASPAR yes 5475963
Genes associated with rs538506598[chr3:125986641], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More