EnhancerDB
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  3. rs538571575[chr2:204548531]
Enhancers that have rs538571575[chr2:204548531]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 204544305 204564235 enh19129
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Blood (OCI-LY7) Stomach Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Spleen Uterus Heart
chr2 204548440 204549024 vista34427
VISTA
Transcript factors that have rs538571575[chr2:204548531]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 204548527 204548538 FLI1 JASPAR yes 22194782
chr2 204548527 204548538 FLI1 JASPAR yes 80254621
chr2 204548528 204548538 GABPA JASPAR yes 22194783
chr2 204548528 204548538 GABPA JASPAR yes 80254622
chr2 204548528 204548539 ELF5 JASPAR yes 22194784
chr2 204548528 204548539 ETV2 JASPAR yes 22194785
chr2 204548528 204548539 ELF5 JASPAR yes 80254623
chr2 204548528 204548539 ETV2 JASPAR yes 80254624
chr2 204548531 204548546 FOXA1 JASPAR yes 22194786
chr2 204548531 204548546 FOXA1 JASPAR yes 80254625
Genes associated with rs538571575[chr2:204548531], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More