EnhancerDB
  1. Home
  2. SNP
  3. rs538575298[chr3:134046160]
Enhancers that have rs538575298[chr3:134046160]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 134023752 134062515 enh20955
Brain (SK-N-MC) Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs538575298[chr3:134046160]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 134045681 134046218 EP300 UCSC Txn Factor no Conserved 108530415
chr3 134045747 134046180 TCF12 UCSC Txn Factor no Conserved 108530417
chr3 134046150 134046165 TFAP2A JASPAR yes 5872853
chr3 134046152 134046167 TFAP2A JASPAR yes 5872854
chr3 134046152 134046167 TFAP2C JASPAR yes 5872855
chr3 134046153 134046166 TFAP2A JASPAR yes 5872856
chr3 134046153 134046166 TFAP2B JASPAR yes 5872857
chr3 134046153 134046166 TFAP2C JASPAR yes 5872858
Genes associated with rs538575298[chr3:134046160], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More