EnhancerDB
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  3. rs538579897[chr17:64545259]
Enhancers that have rs538579897[chr17:64545259]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 64532553 64550230 enh4536
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
chr17 64544919 64545280 vista25602
VISTA
Transcript factors that have rs538579897[chr17:64545259]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 64545248 64545259 CDX2 JASPAR yes 21277769
chr17 64545248 64545259 CDX2 JASPAR yes 55447413
chr17 64545253 64545274 IRF1 JASPAR yes 21277770
chr17 64545253 64545274 IRF1 JASPAR yes 55447414
chr17 64545255 64545270 STAT2 JASPAR yes 21277771
chr17 64545255 64545270 STAT2 JASPAR yes 55447415
chr17 64545256 64545270 STAT1 JASPAR yes 21277772
chr17 64545256 64545270 STAT1 JASPAR yes 55447416
chr17 64545256 64545277 IRF1 JASPAR yes 21277773
chr17 64545256 64545277 IRF1 JASPAR yes 55447417
chr17 64545258 64545273 FOXP1 JASPAR yes 21277774
chr17 64545258 64545273 FOXP1 JASPAR yes 55447418
chr17 64545259 64545274 FOXP1 JASPAR yes 21277775
chr17 64545259 64545274 FOXP1 JASPAR yes 55447419
Genes associated with rs538579897[chr17:64545259], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More