EnhancerDB
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  3. rs538649020[chr6:25164601]
Enhancers that have rs538649020[chr6:25164601]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25163505 25184315 enh23129
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs538649020[chr6:25164601]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25164591 25164607 POU4F3 JASPAR yes 100829993
chr6 25164593 25164607 POU4F1 JASPAR yes 100829994
chr6 25164593 25164608 HNF1A JASPAR yes 100829995
chr6 25164595 25164601 TBP TRANSFAC yes 100829996
chr6 25164599 25164610 PHOX2A JASPAR yes 100829997
chr6 25164599 25164610 PROP1 JASPAR yes 100829998
Genes associated with rs538649020[chr6:25164601], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More