EnhancerDB
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  3. rs538658844[chr19:13273166]
Enhancers that have rs538658844[chr19:13273166]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13265805 13289518 enh17931
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs538658844[chr19:13273166]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13272995 13273299 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21850875
chr19 13273012 13273272 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21850876
chr19 13273159 13273763 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21850877
chr19 13273159 13273763 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108389189
chr19 13273159 13276000 POLR2A UCSC Txn Factor no Conserved 108389190
chr19 13273159 13276000 POLR2A UCSC Txn Factor no Conserved 108389191
chr19 13273159 13276000 POLR2A UCSC Txn Factor no Conserved 108389192
chr19 13273165 13273170 SP1 TRANSFAC yes 112514011
chr19 13273165 13273172 SP1 TRANSFAC yes 112514012
chr19 13273165 13273175 SP1 JASPAR yes 112514013
Genes associated with rs538658844[chr19:13273166], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More