EnhancerDB
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  3. rs538676360[chr17:2826120]
Enhancers that have rs538676360[chr17:2826120]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2825082 2836915 enh4214
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (Karpas-422) Pancreas Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs538676360[chr17:2826120]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2826104 2826125 IRF1 JASPAR yes 52785747
chr17 2826108 2826122 IRF7 JASPAR yes 52785749
chr17 2826108 2826129 IRF1 JASPAR yes 52785750
chr17 2826109 2826130 IRF1 JASPAR yes 52785751
chr17 2826114 2826134 RREB1 JASPAR yes 52785752
chr17 2826114 2826135 IRF1 JASPAR yes 52785753
chr17 2826115 2826121 TCF4 TRANSFAC yes 52785754
chr17 2826115 2826130 FOXP1 JASPAR yes 52785755
chr17 2826115 2826136 IRF1 JASPAR yes 52785756
chr17 2826116 2826131 STAT2 JASPAR yes 52785757
chr17 2826119 2826131 IRF1 JASPAR yes 52785758
chr17 2826120 2826141 IRF1 JASPAR yes 52785759
Genes associated with rs538676360[chr17:2826120], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More