EnhancerDB
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  3. rs538712820[chr19:2558064]
Enhancers that have rs538712820[chr19:2558064]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2555465 2582297 enh17850
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs538712820[chr19:2558064]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2558052 2558067 LEF1 JASPAR yes 112074590
chr19 2558056 2558074 RARA JASPAR yes 112074591
chr19 2558063 2558076 NR2F1 JASPAR yes 112074592
Genes associated with rs538712820[chr19:2558064], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More