EnhancerDB
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  3. rs538733959[chr1:185613058]
Enhancers that have rs538733959[chr1:185613058]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185611645 185629075 enh12480
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs538733959[chr1:185613058]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185613038 185613058 RREB1 JASPAR yes 33829619
chr1 185613038 185613059 ZNF263 JASPAR yes 33829620
chr1 185613039 185613060 ZNF263 JASPAR yes 33829622
chr1 185613042 185613063 ZNF263 JASPAR yes 33829625
chr1 185613043 185613064 ZNF263 JASPAR yes 33829628
chr1 185613050 185613060 SP1 JASPAR yes 33829636
chr1 185613051 185613061 SP1 JASPAR yes 33829637
chr1 185613051 185613072 ZNF263 JASPAR yes 33829638
chr1 185613053 185613059 MAZ TRANSFAC yes 33829639
chr1 185613058 185613063 GATA2 JASPAR yes 33829640
Genes associated with rs538733959[chr1:185613058], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More